Research workbench
AlphaFold monomer V2.0 prediction for RNA polymerase-associated protein rapa (A8G9P6)
Analyse AlphaFold monomer V2.0 prediction for RNA polymerase-associated protein rapa… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A8G9P6
- Type
- protein
- Length
- 968 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5c4adF1416281C09AE8eE1cbb80fF7e44cE86F97
- Molecule
- RNA polymerase-associated protein rapa
- UniProt
- A8G9P6
- Pockets
- 12 · best druggability 0.81
Structure
1 distinct chain · 47% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA polymerase-associated protein rapa | protein | 968 | 47% helix, 18% strand | A8G9P6 |
Pockets
12 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 765 | 0.81 | 0.85 | 83 | empty |
| 2 | 1140 | 0.78 | 0.80 | 102 | empty |
| 3 | 163 | 0.56 | 0.81 | 21 | empty |
| 4 | 198 | 0.52 | 0.78 | 24 | empty |
| 5 | 182 | 0.47 | 0.75 | 28 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A8G9P6
- Elsewhere: UniProt A8G9P6 · AlphaFold DB A8G9P6
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