Research workbench
AlphaFold monomer V2.0 prediction for RNA polymerase-associated protein rapa (A9MYN1)
Analyse AlphaFold monomer V2.0 prediction for RNA polymerase-associated protein rapa… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A9MYN1
- Type
- protein
- Length
- 968 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5c4adF1416281C09AE8eE1cbb80fF7e44cE86F97
- Molecule
- RNA polymerase-associated protein rapa
- UniProt
- A9MYN1
- Pockets
- 6 · best druggability 0.83
Structure
1 distinct chain · 48% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA polymerase-associated protein rapa | protein | 968 | 48% helix, 18% strand | A9MYN1 |
Pockets
6 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 770 | 0.83 | 0.86 | 101 | empty |
| 2 | 1018 | 0.79 | 0.81 | 106 | empty |
| 3 | 228 | 0.56 | 0.79 | 35 | empty |
| 4 | 175 | 0.48 | 0.76 | 36 | empty |
| 5 | 55 | 0.33 | 0.77 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A9MYN1
- Elsewhere: UniProt A9MYN1 · AlphaFold DB A9MYN1
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.