Research workbench
AlphaFold monomer V2.0 prediction for RNA polymerase-associated protein rapa (Q9HYT6)
Analyse AlphaFold monomer V2.0 prediction for RNA polymerase-associated protein rapa… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9HYT6
- Type
- protein
- Length
- 950 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xb4D2d9c96b0D792d0b77e7147D724cc1F801ae58
- Molecule
- RNA polymerase-associated protein rapa
- UniProt
- Q9HYT6
- Pockets
- 12 · best druggability 0.79
Structure
1 distinct chain · 46% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA polymerase-associated protein rapa | protein | 950 | 46% helix, 18% strand | Q9HYT6 |
Pockets
12 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 552 | 0.79 | 0.85 | 71 | empty |
| 2 | 621 | 0.74 | 0.81 | 55 | empty |
| 3 | 634 | 0.72 | 0.79 | 62 | empty |
| 4 | 478 | 0.71 | 0.81 | 62 | empty |
| 5 | 213 | 0.55 | 0.79 | 29 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9HYT6
- Elsewhere: UniProt Q9HYT6 · AlphaFold DB Q9HYT6
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