Research workbench
AlphaFold monomer V2.0 prediction for RNA polymerase-associated protein rapa (Q7N8V1)
Analyse AlphaFold monomer V2.0 prediction for RNA polymerase-associated protein rapa… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q7N8V1
- Type
- protein
- Length
- 970 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9188600a0FCa2914254C94299b1bd9721Bc4D500
- Molecule
- RNA polymerase-associated protein rapa
- UniProt
- Q7N8V1
- Pockets
- 13 · best druggability 0.83
Structure
1 distinct chain · 48% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA polymerase-associated protein rapa | protein | 970 | 48% helix, 18% strand | Q7N8V1 |
Pockets
13 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 615 | 0.83 | 0.88 | 75 | empty |
| 2 | 911 | 0.79 | 0.82 | 107 | empty |
| 3 | 204 | 0.53 | 0.78 | 35 | empty |
| 4 | 201 | 0.51 | 0.77 | 24 | empty |
| 5 | 106 | 0.51 | 0.82 | 18 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q7N8V1
- Elsewhere: UniProt Q7N8V1 · AlphaFold DB Q7N8V1
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