Research workbench
AlphaFold monomer V2.0 prediction for RNA polymerase-associated protein rapa (Q0I5G1)
Analyse AlphaFold monomer V2.0 prediction for RNA polymerase-associated protein rapa… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q0I5G1
- Type
- protein
- Length
- 966 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x064FA49c6b8dFe284029F65208DDf88b7F02240e
- Molecule
- RNA polymerase-associated protein rapa
- UniProt
- Q0I5G1
- Pockets
- 17 · best druggability 0.79
Structure
1 distinct chain · 46% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA polymerase-associated protein rapa | protein | 966 | 46% helix, 18% strand | Q0I5G1 |
Pockets
17 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 806 | 0.79 | 0.83 | 83 | empty |
| 2 | 566 | 0.73 | 0.81 | 47 | empty |
| 3 | 71 | 0.68 | 0.95 | 21 | empty |
| 4 | 104 | 0.58 | 0.86 | 26 | empty |
| 5 | 200 | 0.52 | 0.77 | 21 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q0I5G1
- Elsewhere: UniProt Q0I5G1 · AlphaFold DB Q0I5G1
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