Research workbench
AlphaFold monomer V2.0 prediction for RNA polymerase-associated protein rapa (Q4QMI0)
Analyse AlphaFold monomer V2.0 prediction for RNA polymerase-associated protein rapa… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q4QMI0
- Type
- protein
- Length
- 923 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x429aA010A80A47FF4a2777bB34A2bba144d19df2
- Molecule
- RNA polymerase-associated protein rapa
- UniProt
- Q4QMI0
- Pockets
- 12 · best druggability 0.79
Structure
1 distinct chain · 45% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA polymerase-associated protein rapa | protein | 923 | 45% helix, 19% strand | Q4QMI0 |
Pockets
12 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 667 | 0.79 | 0.84 | 62 | empty |
| 2 | 57 | 0.69 | 0.97 | 18 | empty |
| 3 | 560 | 0.67 | 0.77 | 73 | empty |
| 4 | 233 | 0.61 | 0.81 | 29 | empty |
| 5 | 228 | 0.60 | 0.81 | 33 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q4QMI0
- Elsewhere: UniProt Q4QMI0 · AlphaFold DB Q4QMI0
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