Research workbench
AlphaFold monomer V2.0 prediction for RNA polymerase-associated protein rapa (Q7VKV0)
Analyse AlphaFold monomer V2.0 prediction for RNA polymerase-associated protein rapa… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q7VKV0
- Type
- protein
- Length
- 973 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x362a6d063b1B7E1B6EfD3A9A7CA3612e3FE037AA
- Molecule
- RNA polymerase-associated protein rapa
- UniProt
- Q7VKV0
- Pockets
- 9 · best druggability 0.79
Structure
1 distinct chain · 47% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA polymerase-associated protein rapa | protein | 973 | 47% helix, 18% strand | Q7VKV0 |
Pockets
9 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 888 | 0.79 | 0.81 | 87 | empty |
| 2 | 588 | 0.73 | 0.81 | 53 | empty |
| 3 | 485 | 0.70 | 0.80 | 57 | empty |
| 4 | 420 | 0.62 | 0.77 | 35 | empty |
| 5 | 170 | 0.61 | 0.83 | 26 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q7VKV0
- Elsewhere: UniProt Q7VKV0 · AlphaFold DB Q7VKV0
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