Research workbench
AlphaFold monomer V2.0 prediction for RNA polymerase-associated protein rapa (A4W6G3)
Analyse AlphaFold monomer V2.0 prediction for RNA polymerase-associated protein rapa… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A4W6G3
- Type
- protein
- Length
- 968 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x605d3052093391F2D57b33217931db4627F892dC
- Molecule
- RNA polymerase-associated protein rapa
- UniProt
- A4W6G3
- Pockets
- 12 · best druggability 0.77
Structure
1 distinct chain · 47% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA polymerase-associated protein rapa | protein | 968 | 47% helix, 18% strand | A4W6G3 |
Pockets
12 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1168 | 0.77 | 0.79 | 115 | empty |
| 2 | 548 | 0.75 | 0.83 | 51 | empty |
| 3 | 270 | 0.66 | 0.82 | 35 | empty |
| 4 | 165 | 0.52 | 0.79 | 26 | empty |
| 5 | 53 | 0.50 | 0.87 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A4W6G3
- Elsewhere: UniProt A4W6G3 · AlphaFold DB A4W6G3
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