Research workbench
AlphaFold monomer V2.0 prediction for RNA polymerase-associated protein rapa (B5FGE9)
Analyse AlphaFold monomer V2.0 prediction for RNA polymerase-associated protein rapa… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B5FGE9
- Type
- protein
- Length
- 969 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xdF2b063d4B94F3f46D117B1af99A846bD4a59284
- Molecule
- RNA polymerase-associated protein rapa
- UniProt
- B5FGE9
- Pockets
- 13 · best druggability 0.80
Structure
1 distinct chain · 47% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA polymerase-associated protein rapa | protein | 969 | 47% helix, 18% strand | B5FGE9 |
Pockets
13 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 879 | 0.80 | 0.82 | 92 | empty |
| 2 | 1179 | 0.78 | 0.80 | 121 | empty |
| 3 | 293 | 0.58 | 0.78 | 37 | empty |
| 4 | 202 | 0.52 | 0.77 | 21 | empty |
| 5 | 96 | 0.52 | 0.83 | 24 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B5FGE9
- Elsewhere: UniProt B5FGE9 · AlphaFold DB B5FGE9
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