Research workbench
AlphaFold monomer V2.0 prediction for RAS-related protein rap-1B (Q5RDM6)
Analyse AlphaFold monomer V2.0 prediction for RAS-related protein rap-1B (Q5RDM6) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5RDM6
- Type
- protein
- Length
- 184 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xacc788661A6cCdc9C3614839e76D49650AA38552
- Molecule
- RAS-related protein rap-1B
- UniProt
- Q5RDM6
- Pockets
- 2 · best druggability 0.53
Structure
1 distinct chain · 35% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RAS-related protein rap-1B | protein | 184 | 35% helix, 26% strand | Q5RDM6 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 182 | 0.53 | 0.79 | 33 | empty |
| 2 | 52 | 0.36 | 0.79 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5RDM6
- Elsewhere: UniProt Q5RDM6 · AlphaFold DB Q5RDM6
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