Research workbench
AlphaFold monomer V2.0 prediction for hth-type transcriptional regulator ramb (P9WMI0)
Analyse AlphaFold monomer V2.0 prediction for hth-type transcriptional regulator ramb… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P9WMI0
- Type
- protein
- Length
- 474 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x44E9181FBf88898482e9B5f9f7eBcE7D1B2b0722
- Molecule
- Hth-type transcriptional regulator ramb
- UniProt
- P9WMI0
- Pockets
- 6 · best druggability 0.75
Structure
1 distinct chain · 47% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Hth-type transcriptional regulator ramb | protein | 474 | 47% helix, 12% strand | P9WMI0 |
Pockets
6 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1098 | 0.75 | 0.78 | 81 | empty |
| 2 | 609 | 0.67 | 0.76 | 51 | empty |
| 3 | 99 | 0.50 | 0.82 | 17 | empty |
| 4 | 87 | 0.48 | 0.82 | 17 | empty |
| 5 | 66 | 0.36 | 0.78 | 20 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P9WMI0
- Elsewhere: UniProt P9WMI0 · AlphaFold DB P9WMI0
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