Research workbench
AlphaFold monomer V2.0 prediction for DNA double-strand break repair RAD50 ATPase (O29230)
Analyse AlphaFold monomer V2.0 prediction for DNA double-strand break repair RAD50… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- O29230
- Type
- protein
- Length
- 886 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x28fdd3B14dbA8880a8e7963Eb017057f4385ECCC
- Molecule
- DNA double-strand break repair RAD50 ATPase
- UniProt
- O29230
- Pockets
- 4 · best druggability 0.58
Structure
1 distinct chain · 73% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA double-strand break repair RAD50 ATPase | protein | 886 | 73% helix, 11% strand | O29230 |
Pockets
4 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 379 | 0.58 | 0.75 | 37 | empty |
| 2 | 52 | 0.53 | 0.88 | 14 | empty |
| 3 | 155 | 0.50 | 0.78 | 20 | empty |
| 4 | 101 | 0.37 | 0.75 | 19 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O29230
- Elsewhere: UniProt O29230 · AlphaFold DB O29230
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