Research workbench
AlphaFold monomer V2.0 prediction for DNA repair protein RAD1 (P06777)
Analyse AlphaFold monomer V2.0 prediction for DNA repair protein RAD1 (P06777) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P06777
- Type
- protein
- Length
- 1,100 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x4Ef77Afb5a3D9F41c95Be3227D1CC986CCb61835
- Molecule
- DNA repair protein RAD1
- UniProt
- P06777
- Pockets
- 16 · best druggability 0.76
Structure
1 distinct chain · 50% helix, 10% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA repair protein RAD1 | protein | 1100 | 50% helix, 10% strand | P06777 |
Pockets
16 pockets found on a 1 Å grid, 10 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 597 | 0.76 | 0.83 | 71 | empty |
| 2 | 958 | 0.74 | 0.77 | 67 | empty |
| 3 | 381 | 0.70 | 0.82 | 38 | empty |
| 4 | 537 | 0.69 | 0.79 | 63 | empty |
| 5 | 258 | 0.63 | 0.81 | 37 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P06777
- Elsewhere: UniProt P06777 · AlphaFold DB P06777
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