Research workbench
AlphaFold monomer V2.0 prediction for RAS-related protein rab-23 (Q9ULC3)
Analyse AlphaFold monomer V2.0 prediction for RAS-related protein rab-23 (Q9ULC3) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9ULC3
- Type
- protein
- Length
- 237 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x397a9A38D0a97cDcf063192f1Fc207E33c6Be092
- Molecule
- RAS-related protein rab-23
- UniProt
- Q9ULC3
- Pockets
- 3 · best druggability 0.55
Structure
1 distinct chain · 35% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RAS-related protein rab-23 | protein | 237 | 35% helix, 20% strand | Q9ULC3 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 166 | 0.55 | 0.80 | 31 | empty |
| 2 | 253 | 0.48 | 0.73 | 31 | empty |
| 3 | 110 | 0.39 | 0.75 | 18 | empty |
Compared structures
- 8YIM · Crystal Structure of Human Rab23 in complex with GMPPNP (1.35 Angstroms Resolution) · an experimental structure of the same protein · chain A against A, TM-score 0.67
- 8YNR · Crystal Structure of Human Rab23 in complex with GMPPNP (1.8 Angstroms Resolution) · an experimental structure of the same protein · chain A against A, TM-score 0.66
- 8YO0 · Crystal Structure of Human Rab23 Y79del in Complex with GDP · an experimental structure of the same protein · chain A against A, TM-score 0.66
- 8YL3 · Crystal Structure of Human Rab23 in Complex with GDP · an experimental structure of the same protein · chain A against A, TM-score 0.66
- 8YP0 · Crystal Structure of Human Rab23 Y79del in Complex with GMPPNP · an experimental structure of the same protein · chain A against A, TM-score 0.65
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9ULC3
- Elsewhere: UniProt Q9ULC3 · AlphaFold DB Q9ULC3
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