Research workbench
AlphaFold monomer V2.0 prediction for cytochrome B-C1 complex subunit 2, mitochondrial (Q6C2E3)
Analyse AlphaFold monomer V2.0 prediction for cytochrome B-C1 complex subunit 2… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q6C2E3
- Type
- protein
- Length
- 417 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xf1FcCd396b340C3792db5B4D2953501B9f0EE59d
- Molecule
- Cytochrome B-C1 complex subunit 2, mitochondrial
- UniProt
- Q6C2E3
- Pockets
- 6 · best druggability 0.71
Structure
1 distinct chain · 46% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Cytochrome B-C1 complex subunit 2, mitochondrial | protein | 417 | 46% helix, 20% strand | Q6C2E3 |
Pockets
6 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 793 | 0.71 | 0.77 | 56 | empty |
| 2 | 88 | 0.43 | 0.80 | 27 | empty |
| 3 | 87 | 0.39 | 0.77 | 18 | empty |
| 4 | 102 | 0.36 | 0.74 | 17 | empty |
| 5 | 61 | 0.35 | 0.78 | 15 | empty |
Compared structures
- 8AC4 · Complex III2 from Yarrowia lipolytica, apo, c-position · an experimental structure of the same protein · chain A against B, TM-score 0.96
- 8ABB · Complex III2 from Yarrowia lipolytica, ascorbate-reduced, c-position · an experimental structure of the same protein · chain A against M, TM-score 0.96
- 8ABA · Complex III2 from Yarrowia lipolytica, ascorbate-reduced, int-position · an experimental structure of the same protein · chain A against M, TM-score 0.96
- 8AB7 · Complex III2 from Yarrowia lipolytica, atovaquone and antimycin A bound · an experimental structure of the same protein · chain A against B, TM-score 0.96
- 8ABK · Complex III2 from Yarrowia lipolytica, decylubiquinol bound, b-position · an experimental structure of the same protein · chain A against B, TM-score 0.96
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6C2E3
- Elsewhere: UniProt Q6C2E3 · AlphaFold DB Q6C2E3
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