Research workbench
AlphaFold monomer V2.0 prediction for bifunctional protein pyrr (P41007)
Analyse AlphaFold monomer V2.0 prediction for bifunctional protein pyrr (P41007) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P41007
- Type
- protein
- Length
- 179 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x71351b1FB9B1B80D8d60E1f869F762a9c785B183
- Molecule
- Bifunctional protein pyrr
- UniProt
- P41007
- Pockets
- 1 · best druggability 0.59
Structure
1 distinct chain · 30% helix, 35% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Bifunctional protein pyrr | protein | 179 | 30% helix, 35% strand | P41007 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 336 | 0.59 | 0.77 | 31 | empty |
Compared structures
- 2IGB · Crystal Structure of PyrR, The Regulator Of The Pyrimidine Biosynthetic Operon In… · an experimental structure of the same protein · chain A against B, TM-score 0.95
- 2IGB · Crystal structure of pyrr, the regulator of the pyrimidine biosynthetic operon in… · an experimental structure of the same protein · chain A against B, TM-score 0.95
- 1XZN · Pyrr, the regulator of the pyrimidine biosynthetic operon in bacillus caldolyticus… · an experimental structure of the same protein · chain A against A, TM-score 0.89
- 1XZN · PYRR, THE REGULATOR OF THE PYRIMIDINE BIOSYNTHETIC OPERON IN BACILLUS CALDOLYTICUS… · an experimental structure of the same protein · chain A against A, TM-score 0.89
- 1NON · PyrR, the regulator of the pyrimidine biosynthetic operon in Bacillus caldolyticus · an experimental structure of the same protein · chain A against A, TM-score 0.88
- 1NON · Pyrr, the regulator of the pyrimidine biosynthetic operon in bacillus caldolyticus · an experimental structure of the same protein · chain A against A, TM-score 0.88
- 1XZ8 · Pyrr, the regulator of the pyrimidine biosynthetic operon in bacillus caldolyticus… · an experimental structure of the same protein · chain A against A, TM-score 0.88
- 1XZ8 · Pyrr, The Regulator Of The Pyrimidine Biosynthetic Operon In Bacillus caldolyticus… · an experimental structure of the same protein · chain A against A, TM-score 0.88
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P41007
- Elsewhere: UniProt P41007 · AlphaFold DB P41007
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