AlphaFold monomer V2.0 prediction for phycobilisome rod-core linker polypeptide cpcg (P73093)

Structure

1 distinct chain · 47% helix, 1% strand (DSSP).

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Compared structures

• 7SCA · Synechocystis PCC 6803 Phycobilisome rod from OCP-PBS complex sample · an experimental structure of the same protein · chain A against BK, TM-score 0.76
• 8TRO · Rod from high-resolution phycobilisome quenched by OCP (local refinement) · an experimental structure of the same protein · chain A against a, TM-score 0.76
• 7SC8 · Synechocystis PCC 6803 Phycobilisome rod from PBS sample · an experimental structure of the same protein · chain A against BK, TM-score 0.76
• 7SC7 · Synechocystis PCC 6803 Phycobilisome core from up-down rod conformation · an experimental structure of the same protein · chain A against DE, TM-score 0.17
• 7SC9 · Synechocystis PCC 6803 Phycobilisome core, complex with OCP · an experimental structure of the same protein · chain A against DG, TM-score 0.17
• 7SCC · T-cylinder of Synechocystis PCC 6803 Phycobilisome, complex with OCP - local refinement · an experimental structure of the same protein · chain A against AU, TM-score 0.17
• 7SCB · B-cylinder of Synechocystis PCC 6803 Phycobilisome, complex with OCP - local refinement · an experimental structure of the same protein · chain A against BG, TM-score 0.15
• 8TO2 · Bottom cylinder of high-resolution phycobilisome quenched by OCP (local refinement) · an experimental structure of the same protein · chain A against P, TM-score 0.15
• 8TPJ · Top cylinder bound to OCP from high-resolution phycobilisome quenched by OCP (local… · an experimental structure of the same protein · chain A against Q, TM-score 0.14

Analyse

• Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
• Every structure of UniProt P73093
• Elsewhere: UniProt P73093 · AlphaFold DB P73093