Research workbench
AlphaFold monomer V2.0 prediction for tRNA pseudouridine synthase 1 (Q6CWQ8)
Analyse AlphaFold monomer V2.0 prediction for tRNA pseudouridine synthase 1 (Q6CWQ8) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q6CWQ8
- Type
- protein
- Length
- 553 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xc0eFF0ad418B334150E096a4D0035ef34798A93d
- Molecule
- TRNA pseudouridine synthase 1
- UniProt
- Q6CWQ8
- Pockets
- 7 · best druggability 0.72
Structure
1 distinct chain · 36% helix, 14% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA pseudouridine synthase 1 | protein | 553 | 36% helix, 14% strand | Q6CWQ8 |
Pockets
7 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 666 | 0.72 | 0.79 | 57 | empty |
| 2 | 81 | 0.52 | 0.84 | 18 | empty |
| 3 | 229 | 0.47 | 0.74 | 29 | empty |
| 4 | 183 | 0.44 | 0.74 | 26 | empty |
| 5 | 95 | 0.38 | 0.75 | 19 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6CWQ8
- Elsewhere: UniProt Q6CWQ8 · AlphaFold DB Q6CWQ8
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