Research workbench
AlphaFold monomer V2.0 prediction for pentraxin-4 (Q96A99)
Analyse AlphaFold monomer V2.0 prediction for pentraxin-4 (Q96A99) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q96A99
- Type
- protein
- Length
- 478 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x903d68EF8d4158E11a1CE5C12dC20a18D2164C5b
- Molecule
- Pentraxin-4
- UniProt
- Q96A99
- Pockets
- 2 · best druggability 0.54
Structure
1 distinct chain · 37% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pentraxin-4 | protein | 478 | 37% helix, 19% strand | Q96A99 |
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 171 | 0.54 | 0.80 | 27 | empty |
| 2 | 123 | 0.51 | 0.81 | 19 | empty |
Modifications
Observed in the structure: 3 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q96A99
- Elsewhere: UniProt Q96A99 · AlphaFold DB Q96A99
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