Research workbench
AlphaFold monomer V2.0 prediction for membrane protein PTM1 (P32857)
Analyse AlphaFold monomer V2.0 prediction for membrane protein PTM1 (P32857) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P32857
- Type
- protein
- Length
- 523 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xBF0D2e107Ce1EcD2C4369B042274201DB719AaAF
- Molecule
- Membrane protein PTM1
- UniProt
- P32857
- Pockets
- 10 · best druggability 0.78
Structure
1 distinct chain · 49% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Membrane protein PTM1 | protein | 523 | 49% helix, 15% strand | P32857 |
Pockets
10 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1045 | 0.78 | 0.79 | 78 | empty |
| 2 | 116 | 0.56 | 0.83 | 19 | empty |
| 3 | 96 | 0.44 | 0.79 | 16 | empty |
| 4 | 153 | 0.43 | 0.74 | 22 | empty |
| 5 | 92 | 0.38 | 0.76 | 16 | empty |
Modifications
Observed in the structure: 2 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P32857
- Elsewhere: UniProt P32857 · AlphaFold DB P32857
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