Research workbench
AlphaFold monomer V2.0 prediction for membrane protein PTM1 (A6ZZS6)
Analyse AlphaFold monomer V2.0 prediction for membrane protein PTM1 (A6ZZS6) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A6ZZS6
- Type
- protein
- Length
- 523 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xa73BAb1DabE4333A884D03393eAa10c3B4215494
- Molecule
- Membrane protein PTM1
- UniProt
- A6ZZS6
- Pockets
- 6 · best druggability 0.78
Structure
1 distinct chain · 49% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Membrane protein PTM1 | protein | 523 | 49% helix, 15% strand | A6ZZS6 |
Pockets
6 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 967 | 0.78 | 0.79 | 86 | empty |
| 2 | 109 | 0.56 | 0.84 | 19 | empty |
| 3 | 105 | 0.39 | 0.76 | 21 | empty |
| 4 | 73 | 0.38 | 0.78 | 15 | empty |
| 5 | 132 | 0.38 | 0.73 | 17 | empty |
Modifications
Observed in the structure: 2 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A6ZZS6
- Elsewhere: UniProt A6ZZS6 · AlphaFold DB A6ZZS6
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