Research workbench
AlphaFold monomer V2.0 prediction for type IV secretion system protein ptld homolog (Q7WDU0)
Analyse AlphaFold monomer V2.0 prediction for type IV secretion system protein ptld… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q7WDU0
- Type
- protein
- Length
- 461 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7a1388B6Aad67B04634A32f63b8A6D6005eab86c
- Molecule
- Type IV secretion system protein ptld homolog
- UniProt
- Q7WDU0
- Pockets
- 4 · best druggability 0.80
Structure
1 distinct chain · 70% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Type IV secretion system protein ptld homolog | protein | 461 | 70% helix, 0% strand | Q7WDU0 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 985 | 0.80 | 0.81 | 110 | empty |
| 2 | 70 | 0.31 | 0.74 | 16 | empty |
| 3 | 63 | 0.31 | 0.75 | 13 | empty |
| 4 | 57 | 0.28 | 0.73 | 12 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q7WDU0
- Elsewhere: UniProt Q7WDU0 · AlphaFold DB Q7WDU0
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