Research workbench
AlphaFold monomer V2.0 prediction for peptidyl-tRNA hydrolase (A5F686)
Analyse AlphaFold monomer V2.0 prediction for peptidyl-tRNA hydrolase (A5F686) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A5F686
- Type
- protein
- Length
- 196 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x71112d4fF7ebb3b617963c05f052289e073082FD
- Molecule
- Peptidyl-tRNA hydrolase
- UniProt
- A5F686
- Pockets
- 1 · best druggability 0.41
Structure
1 distinct chain · 44% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Peptidyl-tRNA hydrolase | protein | 196 | 44% helix, 22% strand | A5F686 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 67 | 0.41 | 0.81 | 21 | empty |
Compared structures
- 5B6J · Crystal structure of peptidyl-tRNA hydrolase mutant -H24N from vibrio cholerae · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 5B6J · Crystal structure of Peptidyl-tRNA hydrolase mutant -H24N from Vibrio cholerae · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 5GVZ · Crystal structure of peptidyl-tRNA hydrolase from vibrio cholerae in space group C2221 at… · an experimental structure of the same protein · chain A against A, TM-score 0.98
- 5GVZ · Crystal structure of Peptidyl-tRNA hydrolase from Vibrio cholerae in space group C2221 at… · an experimental structure of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A5F686
- Elsewhere: UniProt A5F686 · AlphaFold DB A5F686
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