Research workbench

AlphaFold monomer V2.0 prediction for tal effector protein PTHXO1 (B2SU53)

Analyse AlphaFold monomer V2.0 prediction for tal effector protein PTHXO1 (B2SU53) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: B2SU53
Type: protein
Length: 1,373 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x3298b100681D3A2372Bba3b2f282750dD71629B9
Molecule: Tal effector protein PTHXO1
UniProt: B2SU53
Pockets: 5 · best druggability 0.76

Structure

1 distinct chain · 61% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Tal effector protein PTHXO1	protein	1373	61% helix, 0% strand	B2SU53

Pockets

5 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	899	0.76	0.79	83	empty
2	1076	0.67	0.73	99	empty
3	269	0.55	0.77	32	empty
4	89	0.37	0.76	17	empty
5	56	0.35	0.78	13	empty

Compared structures

3UGM · Structure of tal effector PTHXO1 bound to its DNA target · an experimental structure of the same protein · chain A against A, TM-score 0.61
3UGM · Structure of TAL effector PthXo1 bound to its DNA target · an experimental structure of the same protein · chain A against A, TM-score 0.61

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt B2SU53
Elsewhere: UniProt B2SU53 · AlphaFold DB B2SU53

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