Research workbench
AlphaFold monomer V2.0 prediction for patched domain-containing protein 1 (Q5RIV7)
Analyse AlphaFold monomer V2.0 prediction for patched domain-containing protein 1… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5RIV7
- Type
- protein
- Length
- 897 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x0F7aAe0F58509eB3BaA013d642d748C7C38B0F93
- Molecule
- Patched domain-containing protein 1
- UniProt
- Q5RIV7
- Pockets
- 14 · best druggability 0.84
Structure
1 distinct chain · 64% helix, 10% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Patched domain-containing protein 1 | protein | 897 | 64% helix, 10% strand | Q5RIV7 |
Pockets
14 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 976 | 0.84 | 0.85 | 72 | empty |
| 2 | 290 | 0.69 | 0.83 | 38 | empty |
| 3 | 414 | 0.69 | 0.80 | 36 | empty |
| 4 | 159 | 0.57 | 0.82 | 18 | empty |
| 5 | 83 | 0.50 | 0.83 | 17 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5RIV7
- Elsewhere: UniProt Q5RIV7 · AlphaFold DB Q5RIV7
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