Research workbench
AlphaFold monomer V2.0 prediction for pentatricopeptide repeat domain-containing protein 3, mitochondrial (Q5R8W8)
Analyse AlphaFold monomer V2.0 prediction for pentatricopeptide repeat… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5R8W8
- Type
- protein
- Length
- 689 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x1ED4a68B4011314730adE976b56Ad4cA21b54dcD
- Molecule
- Pentatricopeptide repeat domain-containing protein 3, mitochondrial
- UniProt
- Q5R8W8
- Pockets
- 6 · best druggability 0.49
Structure
1 distinct chain · 59% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pentatricopeptide repeat domain-containing protein 3, mitochondrial | protein | 689 | 59% helix, 0% strand | Q5R8W8 |
Pockets
6 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 212 | 0.49 | 0.75 | 24 | empty |
| 2 | 197 | 0.46 | 0.74 | 21 | empty |
| 3 | 55 | 0.42 | 0.82 | 13 | empty |
| 4 | 138 | 0.40 | 0.74 | 20 | empty |
| 5 | 66 | 0.35 | 0.77 | 11 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5R8W8
- Elsewhere: UniProt Q5R8W8 · AlphaFold DB Q5R8W8
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