Research workbench
AlphaFold monomer V2.0 prediction for polypyrimidine tract-binding protein 1 (Q00438)
Analyse AlphaFold monomer V2.0 prediction for polypyrimidine tract-binding protein 1… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q00438
- Type
- protein
- Length
- 555 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9B130d619fCFc21d0D08E5Ce38Cf42A5fbe230CB
- Molecule
- Polypyrimidine tract-binding protein 1
- UniProt
- Q00438
- Pockets
- 5 · best druggability 0.44
Structure
1 distinct chain · 19% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Polypyrimidine tract-binding protein 1 | protein | 555 | 19% helix, 21% strand | Q00438 |
Pockets
5 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 84 | 0.44 | 0.80 | 17 | empty |
| 2 | 100 | 0.35 | 0.73 | 19 | empty |
| 3 | 120 | 0.34 | 0.72 | 21 | empty |
| 4 | 55 | 0.30 | 0.75 | 12 | empty |
| 5 | 53 | 0.25 | 0.73 | 11 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q00438
- Elsewhere: UniProt Q00438 · AlphaFold DB Q00438
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