Research workbench
AlphaFold monomer V2.0 prediction for platelet-activating factor receptor (P46002)
Analyse AlphaFold monomer V2.0 prediction for platelet-activating factor receptor… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P46002
- Type
- protein
- Length
- 341 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x0E31920A67aafd5e006BeA2a197680e7C7330186
- Molecule
- Platelet-activating factor receptor
- UniProt
- P46002
- Pockets
- 6 · best druggability 0.80
Structure
1 distinct chain · 74% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Platelet-activating factor receptor | protein | 341 | 74% helix, 3% strand | P46002 |
Pockets
6 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 181 | 0.80 | 0.94 | 28 | empty |
| 2 | 194 | 0.52 | 0.77 | 26 | empty |
| 3 | 202 | 0.51 | 0.76 | 26 | empty |
| 4 | 120 | 0.47 | 0.79 | 22 | empty |
| 5 | 59 | 0.46 | 0.84 | 15 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P46002
- Elsewhere: UniProt P46002 · AlphaFold DB P46002
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