Research workbench
AlphaFold monomer V2.0 prediction for pre-tRNA-processing protein PTA1 (Q01329)
Analyse AlphaFold monomer V2.0 prediction for pre-tRNA-processing protein PTA1 (Q01329) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q01329
- Type
- protein
- Length
- 785 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x40B9C9d5F084D34d026E9d5Dd10501AcdF6d6152
- Molecule
- Pre-tRNA-processing protein PTA1
- UniProt
- Q01329
- Pockets
- 7 · best druggability 0.60
Structure
1 distinct chain · 62% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pre-tRNA-processing protein PTA1 | protein | 785 | 62% helix, 0% strand | Q01329 |
Pockets
7 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 235 | 0.60 | 0.80 | 41 | empty |
| 2 | 161 | 0.47 | 0.76 | 19 | empty |
| 3 | 134 | 0.41 | 0.75 | 19 | empty |
| 4 | 71 | 0.37 | 0.77 | 14 | empty |
| 5 | 98 | 0.36 | 0.75 | 20 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q01329
- Elsewhere: UniProt Q01329 · AlphaFold DB Q01329
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