Research workbench
AlphaFold monomer V2.0 prediction for pseudouridine-5'-phosphate glycosidase (C1AA54)
Analyse AlphaFold monomer V2.0 prediction for pseudouridine-5'-phosphate glycosidase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- C1AA54
- Type
- protein
- Length
- 306 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x0a5E8971Bc8668384f357c645750797DdfA6b629
- Molecule
- Pseudouridine-5'-phosphate glycosidase
- UniProt
- C1AA54
- Pockets
- 5 · best druggability 0.67
Structure
1 distinct chain · 47% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pseudouridine-5'-phosphate glycosidase | protein | 306 | 47% helix, 18% strand | C1AA54 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 216 | 0.67 | 0.85 | 37 | empty |
| 2 | 53 | 0.48 | 0.86 | 16 | empty |
| 3 | 75 | 0.40 | 0.79 | 16 | empty |
| 4 | 51 | 0.33 | 0.78 | 14 | empty |
| 5 | 63 | 0.28 | 0.73 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C1AA54
- Elsewhere: UniProt C1AA54 · AlphaFold DB C1AA54
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