Research workbench
AlphaFold monomer V2.0 prediction for pseudouridine-5'-phosphate glycosidase (B8JB61)
Analyse AlphaFold monomer V2.0 prediction for pseudouridine-5'-phosphate glycosidase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B8JB61
- Type
- protein
- Length
- 310 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x97EfFf2d74994e28D3b69b1503Bd9c292B2Df480
- Molecule
- Pseudouridine-5'-phosphate glycosidase
- UniProt
- B8JB61
- Pockets
- 5 · best druggability 0.72
Structure
1 distinct chain · 47% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pseudouridine-5'-phosphate glycosidase | protein | 310 | 47% helix, 17% strand | B8JB61 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 254 | 0.72 | 0.86 | 38 | empty |
| 2 | 80 | 0.53 | 0.85 | 29 | empty |
| 3 | 151 | 0.45 | 0.76 | 20 | empty |
| 4 | 54 | 0.43 | 0.83 | 14 | empty |
| 5 | 97 | 0.40 | 0.77 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B8JB61
- Elsewhere: UniProt B8JB61 · AlphaFold DB B8JB61
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