Research workbench
AlphaFold monomer V2.0 prediction for cdp-diacylglycerol--serine O-phosphatidyltransferase 1 (Q0JR55)
Analyse AlphaFold monomer V2.0 prediction for cdp-diacylglycerol--serine… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q0JR55
- Type
- protein
- Length
- 425 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7fD0d808d9DD0f826A6CBD6764A5B55C527677a5
- Molecule
- Cdp-diacylglycerol--serine O-phosphatidyltransferase 1
- UniProt
- Q0JR55
- Pockets
- 7 · best druggability 0.81
Structure
1 distinct chain · 67% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Cdp-diacylglycerol--serine O-phosphatidyltransferase 1 | protein | 425 | 67% helix, 0% strand | Q0JR55 |
Pockets
7 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 675 | 0.81 | 0.85 | 62 | empty |
| 2 | 545 | 0.70 | 0.79 | 39 | empty |
| 3 | 497 | 0.63 | 0.76 | 52 | empty |
| 4 | 184 | 0.58 | 0.81 | 31 | empty |
| 5 | 221 | 0.57 | 0.79 | 26 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q0JR55
- Elsewhere: UniProt Q0JR55 · AlphaFold DB Q0JR55
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