Research workbench
AlphaFold monomer V2.0 prediction for presenilin-1 (Q9XT97)
Analyse AlphaFold monomer V2.0 prediction for presenilin-1 (Q9XT97) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9XT97
- Type
- protein
- Length
- 478 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x429aA010A80A47FF4a2777bB34A2bba144d19df2
- Molecule
- Presenilin-1
- UniProt
- Q9XT97
- Pockets
- 4 · best druggability 0.81
Structure
1 distinct chain · 61% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Presenilin-1 | protein | 478 | 61% helix, 1% strand | Q9XT97 |
Pockets
4 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 900 | 0.81 | 0.82 | 63 | empty |
| 2 | 188 | 0.64 | 0.84 | 23 | empty |
| 3 | 135 | 0.57 | 0.83 | 24 | empty |
| 4 | 52 | 0.31 | 0.77 | 12 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9XT97
- Elsewhere: UniProt Q9XT97 · AlphaFold DB Q9XT97
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