Research workbench
AlphaFold monomer V2.0 prediction for probable 26S proteasome regulatory subunit P27 (P40555)
Analyse AlphaFold monomer V2.0 prediction for probable 26S proteasome regulatory… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P40555
- Type
- protein
- Length
- 220 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5c4adF1416281C09AE8eE1cbb80fF7e44cE86F97
- Molecule
- Probable 26S proteasome regulatory subunit P27
- UniProt
- P40555
- Pockets
- 1 · best druggability 0.36
Structure
1 distinct chain · 46% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Probable 26S proteasome regulatory subunit P27 | protein | 220 | 46% helix, 15% strand | P40555 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 84 | 0.36 | 0.75 | 13 | empty |
Compared structures
- 3WHJ · Crystal structure of Nas2 N-terminal domain · an experimental structure of the same protein · chain A against A, TM-score 0.43
- 3WHJ · Crystal structure of NAS2 N-terminal domain · an experimental structure of the same protein · chain A against A, TM-score 0.43
- 4O06 · 1.15A resolution structure of the proteasome assembly chaperone NAS2 PDZ domain · an experimental structure of the same protein · chain A against A, TM-score 0.42
- 4O06 · 1.15A Resolution Structure of the Proteasome Assembly Chaperone Nas2 PDZ Domain · an experimental structure of the same protein · chain A against A, TM-score 0.42
- 3WHL · Crystal structure of Nas2 N-terminal domain complexed with PAN-Rpt5C chimera · an experimental structure of the same protein · chain A against H, TM-score 0.38
- 3WHL · Crystal structure of NAS2 N-terminal domain complexed with pan-RPT5C chimera · an experimental structure of the same protein · chain A against H, TM-score 0.38
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P40555
- Elsewhere: UniProt P40555 · AlphaFold DB P40555
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