Research workbench
AlphaFold monomer V2.0 prediction for protein psip (Q54VS2)
Analyse AlphaFold monomer V2.0 prediction for protein psip (Q54VS2) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q54VS2
- Type
- protein
- Length
- 756 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5c4adF1416281C09AE8eE1cbb80fF7e44cE86F97
- Molecule
- Protein psip
- UniProt
- Q54VS2
- Pockets
- 8 · best druggability 0.65
Structure
1 distinct chain · 11% helix, 33% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein psip | protein | 756 | 11% helix, 33% strand | Q54VS2 |
Pockets
8 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 220 | 0.65 | 0.84 | 33 | empty |
| 2 | 129 | 0.54 | 0.82 | 28 | empty |
| 3 | 66 | 0.52 | 0.86 | 21 | empty |
| 4 | 63 | 0.36 | 0.78 | 13 | empty |
| 5 | 80 | 0.32 | 0.74 | 15 | empty |
Modifications
Observed in the structure: 30 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q54VS2
- Elsewhere: UniProt Q54VS2 · AlphaFold DB Q54VS2
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