Research workbench
AlphaFold monomer V2.0 prediction for protein psio (Q54VS4)
Analyse AlphaFold monomer V2.0 prediction for protein psio (Q54VS4) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q54VS4
- Type
- protein
- Length
- 750 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x78Cc7f9BF18AF8279e492D45EE7Fe9d7cC6f6D07
- Molecule
- Protein psio
- UniProt
- Q54VS4
- Pockets
- 10 · best druggability 0.70
Structure
1 distinct chain · 12% helix, 32% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein psio | protein | 750 | 12% helix, 32% strand | Q54VS4 |
Pockets
10 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 715 | 0.70 | 0.77 | 71 | empty |
| 2 | 259 | 0.58 | 0.78 | 34 | empty |
| 3 | 157 | 0.46 | 0.76 | 27 | empty |
| 4 | 87 | 0.44 | 0.80 | 15 | empty |
| 5 | 127 | 0.37 | 0.73 | 25 | empty |
Modifications
Observed in the structure: 31 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q54VS4
- Elsewhere: UniProt Q54VS4 · AlphaFold DB Q54VS4
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