Research workbench

AlphaFold monomer V2.0 prediction for udp-4-amino-4,6-dideoxy-N- acetyl-beta-L-altrosamine transaminase (O25130)

Analyse AlphaFold monomer V2.0 prediction for udp-4-amino-4,6-dideoxy-N… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: O25130
Type: protein
Length: 375 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0xBeB220F0B5b0C48F46B5DDd3E3b071BC0827f8D6
Molecule: Udp-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase
UniProt: O25130
Pockets: 2 · best druggability 0.49

Structure

1 distinct chain · 43% helix, 18% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Udp-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase	protein	375	43% helix, 18% strand	O25130

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	99	0.49	0.81	21	empty
2	85	0.35	0.75	17	empty

Compared structures

2FNU · PseC aminotransferase with external aldimine · an experimental structure of the same protein · chain A against B, TM-score 0.99
2FNU · Psec aminotransferase with external aldimine · an experimental structure of the same protein · chain A against B, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O25130
Elsewhere: UniProt O25130 · AlphaFold DB O25130

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.