Research workbench
AlphaFold monomer V2.0 prediction for pH and SEC7 domain-containing protein 4 (Q8NDX1)
Analyse AlphaFold monomer V2.0 prediction for pH and SEC7 domain-containing protein 4… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8NDX1
- Type
- protein
- Length
- 1,056 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xF971BC1E31DB67C28a8EC14693C86CbCA4944ae3
- Molecule
- PH and SEC7 domain-containing protein 4
- UniProt
- Q8NDX1
- Pockets
- 6 · best druggability 0.76
Structure
1 distinct chain · 23% helix, 5% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | PH and SEC7 domain-containing protein 4 | protein | 1056 | 23% helix, 5% strand | Q8NDX1 |
Pockets
6 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 970 | 0.76 | 0.78 | 89 | empty |
| 2 | 464 | 0.65 | 0.77 | 47 | empty |
| 3 | 198 | 0.55 | 0.79 | 28 | empty |
| 4 | 89 | 0.34 | 0.73 | 20 | empty |
| 5 | 54 | 0.28 | 0.74 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8NDX1
- Elsewhere: UniProt Q8NDX1 · AlphaFold DB Q8NDX1
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