Research workbench
AlphaFold monomer V2.0 prediction for photosystem II D2 protein (Q2JKT8)
Analyse AlphaFold monomer V2.0 prediction for photosystem II D2 protein (Q2JKT8) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q2JKT8
- Type
- protein
- Length
- 352 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xEa58c7534E5701aA8370E0fAEb19b7e14653e69c
- Molecule
- Photosystem II D2 protein
- UniProt
- Q2JKT8
- Pockets
- 4 · best druggability 0.58
Structure
1 distinct chain · 63% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Photosystem II D2 protein | protein | 352 | 63% helix, 2% strand | Q2JKT8 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 109 | 0.58 | 0.85 | 18 | empty |
| 2 | 117 | 0.48 | 0.79 | 20 | empty |
| 3 | 163 | 0.47 | 0.76 | 21 | empty |
| 4 | 110 | 0.35 | 0.72 | 23 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q2JKT8
- Elsewhere: UniProt Q2JKT8 · AlphaFold DB Q2JKT8
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