Research workbench
AlphaFold monomer V2.0 prediction for photosystem II D2 protein (B0Z540)
Analyse AlphaFold monomer V2.0 prediction for photosystem II D2 protein (B0Z540) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B0Z540
- Type
- protein
- Length
- 353 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x66e4d6BF97F1E37D3f479b250639fc6429e652f4
- Molecule
- Photosystem II D2 protein
- UniProt
- B0Z540
- Pockets
- 3 · best druggability 0.61
Structure
1 distinct chain · 63% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Photosystem II D2 protein | protein | 353 | 63% helix, 2% strand | B0Z540 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 101 | 0.61 | 0.87 | 18 | empty |
| 2 | 233 | 0.50 | 0.74 | 32 | empty |
| 3 | 119 | 0.46 | 0.78 | 21 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B0Z540
- Elsewhere: UniProt B0Z540 · AlphaFold DB B0Z540
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