Research workbench
AlphaFold monomer V2.0 prediction for photosystem II D2 protein (Q9TL00)
Analyse AlphaFold monomer V2.0 prediction for photosystem II D2 protein (Q9TL00) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9TL00
- Type
- protein
- Length
- 352 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xe354e80AEdde0A05f672D405ccd4E5dC19c865fC
- Molecule
- Photosystem II D2 protein
- UniProt
- Q9TL00
- Pockets
- 4 · best druggability 0.60
Structure
1 distinct chain · 63% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Photosystem II D2 protein | protein | 352 | 63% helix, 2% strand | Q9TL00 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 111 | 0.60 | 0.85 | 18 | empty |
| 2 | 188 | 0.47 | 0.74 | 23 | empty |
| 3 | 118 | 0.45 | 0.78 | 21 | empty |
| 4 | 85 | 0.33 | 0.73 | 18 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9TL00
- Elsewhere: UniProt Q9TL00 · AlphaFold DB Q9TL00
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