Research workbench
AlphaFold monomer V2.0 prediction for photosystem II D2 protein (Q56P05)
Analyse AlphaFold monomer V2.0 prediction for photosystem II D2 protein (Q56P05) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q56P05
- Type
- protein
- Length
- 353 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xbff27Dc0a932A6E0d9Fe883AAbD1BF27bB95A69F
- Molecule
- Photosystem II D2 protein
- UniProt
- Q56P05
- Pockets
- 3 · best druggability 0.63
Structure
1 distinct chain · 63% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Photosystem II D2 protein | protein | 353 | 63% helix, 2% strand | Q56P05 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 97 | 0.63 | 0.88 | 18 | empty |
| 2 | 324 | 0.55 | 0.74 | 40 | empty |
| 3 | 119 | 0.49 | 0.80 | 22 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q56P05
- Elsewhere: UniProt Q56P05 · AlphaFold DB Q56P05
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