Research workbench
AlphaFold monomer V2.0 prediction for photosystem II D2 protein (A7Y3C4)
Analyse AlphaFold monomer V2.0 prediction for photosystem II D2 protein (A7Y3C4) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A7Y3C4
- Type
- protein
- Length
- 353 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x35612D34a32C306CA4fc1edA9360D1F717e25950
- Molecule
- Photosystem II D2 protein
- UniProt
- A7Y3C4
- Pockets
- 3 · best druggability 0.60
Structure
1 distinct chain · 63% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Photosystem II D2 protein | protein | 353 | 63% helix, 2% strand | A7Y3C4 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 94 | 0.60 | 0.87 | 17 | empty |
| 2 | 310 | 0.55 | 0.75 | 41 | empty |
| 3 | 105 | 0.48 | 0.80 | 21 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A7Y3C4
- Elsewhere: UniProt A7Y3C4 · AlphaFold DB A7Y3C4
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