Research workbench
AlphaFold monomer V2.0 prediction for photosystem II D2 protein (B3TNB8)
Analyse AlphaFold monomer V2.0 prediction for photosystem II D2 protein (B3TNB8) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B3TNB8
- Type
- protein
- Length
- 353 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x78Cc7f9BF18AF8279e492D45EE7Fe9d7cC6f6D07
- Molecule
- Photosystem II D2 protein
- UniProt
- B3TNB8
- Pockets
- 4 · best druggability 0.59
Structure
1 distinct chain · 63% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Photosystem II D2 protein | protein | 353 | 63% helix, 2% strand | B3TNB8 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 93 | 0.59 | 0.86 | 18 | empty |
| 2 | 117 | 0.49 | 0.80 | 23 | empty |
| 3 | 155 | 0.45 | 0.75 | 21 | empty |
| 4 | 100 | 0.35 | 0.73 | 20 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B3TNB8
- Elsewhere: UniProt B3TNB8 · AlphaFold DB B3TNB8
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