Research workbench
AlphaFold monomer V2.0 prediction for photosystem II CP43 reaction center protein (B2Y1U6)
Analyse AlphaFold monomer V2.0 prediction for photosystem II CP43 reaction center… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B2Y1U6
- Type
- protein
- Length
- 473 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x0e1cf82d2E07cf9FCd6ce0e123Bc9584e4F92CaD
- Molecule
- Photosystem II CP43 reaction center protein
- UniProt
- B2Y1U6
- Pockets
- 8 · best druggability 0.63
Structure
1 distinct chain · 55% helix, 5% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Photosystem II CP43 reaction center protein | protein | 473 | 55% helix, 5% strand | B2Y1U6 |
Pockets
8 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 395 | 0.63 | 0.77 | 30 | empty |
| 2 | 548 | 0.62 | 0.74 | 49 | empty |
| 3 | 306 | 0.61 | 0.79 | 39 | empty |
| 4 | 85 | 0.37 | 0.76 | 17 | empty |
| 5 | 56 | 0.31 | 0.76 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B2Y1U6
- Elsewhere: UniProt B2Y1U6 · AlphaFold DB B2Y1U6
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