Research workbench
AlphaFold monomer V2.0 prediction for photosystem II CP43 reaction center protein (P06414)
Analyse AlphaFold monomer V2.0 prediction for photosystem II CP43 reaction center… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P06414
- Type
- protein
- Length
- 473 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x556B5F949095C71590D201CC2FbEA0Ca9e5aD1d7
- Molecule
- Photosystem II CP43 reaction center protein
- UniProt
- P06414
- Pockets
- 6 · best druggability 0.64
Structure
1 distinct chain · 55% helix, 5% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Photosystem II CP43 reaction center protein | protein | 473 | 55% helix, 5% strand | P06414 |
Pockets
6 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 419 | 0.64 | 0.77 | 28 | empty |
| 2 | 522 | 0.62 | 0.74 | 51 | empty |
| 3 | 258 | 0.59 | 0.79 | 31 | empty |
| 4 | 72 | 0.39 | 0.78 | 17 | empty |
| 5 | 82 | 0.33 | 0.74 | 19 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P06414
- Elsewhere: UniProt P06414 · AlphaFold DB P06414
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