Research workbench
AlphaFold monomer V2.0 prediction for photosystem II CP43 reaction center protein (A8Y9F6)
Analyse AlphaFold monomer V2.0 prediction for photosystem II CP43 reaction center… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A8Y9F6
- Type
- protein
- Length
- 473 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x2F6bF430f3601bBa63610839f7537AE491c6C9Fe
- Molecule
- Photosystem II CP43 reaction center protein
- UniProt
- A8Y9F6
- Pockets
- 6 · best druggability 0.64
Structure
1 distinct chain · 55% helix, 5% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Photosystem II CP43 reaction center protein | protein | 473 | 55% helix, 5% strand | A8Y9F6 |
Pockets
6 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 445 | 0.64 | 0.77 | 29 | empty |
| 2 | 517 | 0.62 | 0.75 | 43 | empty |
| 3 | 288 | 0.60 | 0.79 | 33 | empty |
| 4 | 71 | 0.36 | 0.77 | 17 | empty |
| 5 | 78 | 0.30 | 0.73 | 19 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A8Y9F6
- Elsewhere: UniProt A8Y9F6 · AlphaFold DB A8Y9F6
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