Research workbench
AlphaFold monomer V2.0 prediction for photosystem II CP43 reaction center protein (B2LMI9)
Analyse AlphaFold monomer V2.0 prediction for photosystem II CP43 reaction center… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B2LMI9
- Type
- protein
- Length
- 473 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xc89196C322FE9e05035e4b8D6285E4a3d7C15eeC
- Molecule
- Photosystem II CP43 reaction center protein
- UniProt
- B2LMI9
- Pockets
- 8 · best druggability 0.64
Structure
1 distinct chain · 55% helix, 5% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Photosystem II CP43 reaction center protein | protein | 473 | 55% helix, 5% strand | B2LMI9 |
Pockets
8 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 458 | 0.64 | 0.77 | 41 | empty |
| 2 | 470 | 0.61 | 0.75 | 41 | empty |
| 3 | 286 | 0.61 | 0.79 | 33 | empty |
| 4 | 61 | 0.38 | 0.80 | 21 | empty |
| 5 | 55 | 0.34 | 0.78 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B2LMI9
- Elsewhere: UniProt B2LMI9 · AlphaFold DB B2LMI9
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