Research workbench
AlphaFold monomer V2.0 prediction for photosystem II CP43 reaction center protein (A9LYI1)
Analyse AlphaFold monomer V2.0 prediction for photosystem II CP43 reaction center… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A9LYI1
- Type
- protein
- Length
- 473 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5393E64D505A2ad756137BF409602d66Db6998C3
- Molecule
- Photosystem II CP43 reaction center protein
- UniProt
- A9LYI1
- Pockets
- 9 · best druggability 0.65
Structure
1 distinct chain · 55% helix, 5% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Photosystem II CP43 reaction center protein | protein | 473 | 55% helix, 5% strand | A9LYI1 |
Pockets
9 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 428 | 0.65 | 0.77 | 29 | empty |
| 2 | 569 | 0.63 | 0.74 | 46 | empty |
| 3 | 273 | 0.60 | 0.79 | 34 | empty |
| 4 | 126 | 0.42 | 0.76 | 31 | empty |
| 5 | 78 | 0.31 | 0.73 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A9LYI1
- Elsewhere: UniProt A9LYI1 · AlphaFold DB A9LYI1
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