Research workbench
AlphaFold monomer V2.0 prediction for photosystem II CP47 reaction center protein (B1A961)
Analyse AlphaFold monomer V2.0 prediction for photosystem II CP47 reaction center… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B1A961
- Type
- protein
- Length
- 508 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xfdf43E25548A6F2259b983138c11e47b2f207335
- Molecule
- Photosystem II CP47 reaction center protein
- UniProt
- B1A961
- Pockets
- 10 · best druggability 0.58
Structure
1 distinct chain · 48% helix, 10% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Photosystem II CP47 reaction center protein | protein | 508 | 48% helix, 10% strand | B1A961 |
Pockets
10 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 399 | 0.58 | 0.74 | 41 | empty |
| 2 | 154 | 0.55 | 0.81 | 22 | empty |
| 3 | 50 | 0.54 | 0.89 | 26 | empty |
| 4 | 74 | 0.52 | 0.85 | 16 | empty |
| 5 | 84 | 0.38 | 0.76 | 18 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B1A961
- Elsewhere: UniProt B1A961 · AlphaFold DB B1A961
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